Stem-loop pny-mir-124-5

Accession

MI0034876

Description

Pundamilia nyererei pny-mir-124-5 precursor miRNA

Sequence

2077 reads, 165.0 reads per million, 7 experiments

CGUGUUCACGGCGGACCUUGAUUuauuagccauacaauUAAGGCACGCGGUGAAUGCCA
.((((((((.(((..(((((((((((.....))).))))))))..))).))))))))..

Structure

-C        G   GA        -   u 
  GUGUUCAC GCG  CCUUGAUU uau a
  |||||||| |||  |||||||| ||| g
  CGUAAGUG CGC  GGAAUuaa aua c
AC        G   AC        c   c 

Annotation confidence High

Genome context

JH419249.1: 611668-611726 [+]

Mature pny-miR-124-5-5p

• Accession: MIMAT0060321
• Description: Pundamilia nyererei pny-miR-124-5-5p mature miRNA
• Sequence: 1 - CGUGUUCACGGCGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-124-3p

• Accession: MIMAT0042896
• Description: Pundamilia nyererei pny-miR-124-3p mature miRNA
• Sequence: 39 - UAAGGCACGCGGUGAAUGCCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381