Stem-loop pny-mir-124-6

Accession

MI0034877

Description

Pundamilia nyererei pny-mir-124-6 precursor miRNA

Sequence

1883 reads, 148.0 reads per million, 7 experiments

aGUGUUCACAGUGGACCUUGAUUuaaaaucagucaauUAAGGCACGCGGUGAAUGCCA
.((((((((.(((..((((((((...........))))))))..))).))))))))..

Structure

-a        A   GA        uaaa 
  GUGUUCAC GUG  CCUUGAUU    a
  |||||||| |||  ||||||||    u
  CGUAAGUG CGC  GGAAUuaa    c
AC        G   AC        cuga 

Annotation confidence High

Genome context

JH419701.1: 192599-192656 [-]

Mature pny-miR-124-6-5p

• Accession: MIMAT0060322
• Description: Pundamilia nyererei pny-miR-124-6-5p mature miRNA
• Sequence: 2 - GUGUUCACAGUGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-124-3p

• Accession: MIMAT0042896
• Description: Pundamilia nyererei pny-miR-124-3p mature miRNA
• Sequence: 38 - UAAGGCACGCGGUGAAUGCCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381