Stem-loop pny-mir-128-2

Accession

MI0034881

Description

Pundamilia nyererei pny-mir-128-2 precursor miRNA

Sequence

568429 reads, 50123.0 reads per million, 7 experiments

GGGGGCCGUUACACUGUCAGAgauguagucugagggucUCACAGUGAACCGGUCUCUUU
((((((((...((((((..(((((.(.......).)))))))))))...))))))))..

Structure

--        UUA      CA     g ag 
  GGGGGCCG   CACUGU  GAgau u  u
  ||||||||   ||||||  ||||| |  c
  UCUCUGGC   GUGACA  CUcug g  u
UU        CAA      --     g ag 

Annotation confidence High

Genome context

JH419233.1: 1185512-1185570 [-]

Mature pny-miR-128-2-5p

• Accession: MIMAT0060331
• Description: Pundamilia nyererei pny-miR-128-2-5p mature miRNA
• Sequence: 1 - GGGGGCCGUUACACUGUCAGA - 21
• Evidence: experimental ; Illumina [1]

Mature pny-miR-128-3p

• Accession: MIMAT0042903
• Description: Pundamilia nyererei pny-miR-128-3p mature miRNA
• Sequence: 39 - UCACAGUGAACCGGUCUCUUU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381