Stem-loop pny-mir-196a

Accession

MI0034912

Description

Pundamilia nyererei pny-mir-196a precursor miRNA

Sequence

4726 reads, 408.0 reads per million, 7 experiments

UAGGUAGUUUCAUGUUGUUGGGguccauuucuaacucugcaacaugaaacugucuua
.(((((((((((((((((.(((............))).)))))))))))))))))..

Structure

-U                 U   gucca 
  AGGUAGUUUCAUGUUGU GGG     u
  ||||||||||||||||| |||      
  ucugucaaaguacaacg cuc     u
au                 u   aaucu 

Annotation confidence Not enough data

Genome context

JH419235.1: 1325371-1325427 [-]

Mature pny-miR-196a-5p

• Accession: MIMAT0042933
• Description: Pundamilia nyererei pny-miR-196a-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCAUGUUGUUGGG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381