Stem-loop pny-mir-129-3

Accession

MI0034921

Description

Pundamilia nyererei pny-mir-129-3 precursor miRNA

Sequence

25588 reads, 2245.0 reads per million, 7 experiments

CUUUUUGCGGUCUGGGCUUGCugucaugugucuauccaggAAGCCCUUACCCCAAAAAGCAU
(((((((.(((..((((((.(((.............))).))))))..))).)))))))...

Structure

---       C   CU      G   ucaug 
   CUUUUUG GGU  GGGCUU Cug     u
   ||||||| |||  |||||| |||     g
   GAAAAAC CCA  CCCGAA gac     u
UAC       C   UU      g   cuauc 

Annotation confidence High

Genome context

JH419591.1: 193142-193203 [-]

Mature pny-miR-129-5p

• Accession: MIMAT0042938
• Description: Pundamilia nyererei pny-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature pny-miR-129-3p

• Accession: MIMAT0060366
• Description: Pundamilia nyererei pny-miR-129-3p mature miRNA
• Sequence: 41 - AAGCCCUUACCCCAAAAAGCAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381