Stem-loop pny-mir-187

Accession

MI0034936

Description

Pundamilia nyererei pny-mir-187 precursor miRNA

Sequence

4091 reads, 357.0 reads per million, 7 experiments

GGCUGCAACACAGGACAUGGGUccugccucuccuccccgcUCGUGUCUUGUGUUGCAGCCAG
((((((((((((((((((((((................))))))))))))))))))))))..

Structure

--                      ccugccu 
  GGCUGCAACACAGGACAUGGGU       c
  ||||||||||||||||||||||        
  CCGACGUUGUGUUCUGUGCUcg       u
GA                      ccccucc 

Annotation confidence High

Genome context

JH419233.1: 753689-753750 [-]

Mature pny-miR-187-5p

• Accession: MIMAT0060378
• Description: Pundamilia nyererei pny-miR-187-5p mature miRNA
• Sequence: 1 - GGCUGCAACACAGGACAUGGGU - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-187-3p

• Accession: MIMAT0042949
• Description: Pundamilia nyererei pny-miR-187-3p mature miRNA
• Sequence: 41 - UCGUGUCUUGUGUUGCAGCCAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381