Stem-loop pny-mir-29a-3

Accession

MI0034940

Description

Pundamilia nyererei pny-mir-29a-3 precursor miRNA

Sequence

196 reads, 17.0 reads per million, 7 experiments

acugauuucuucuggugcuuagagcccgcugaagccuucUAGCACCAUUUGAAAUCGGUUA
(((((((((...(((((((.((((...((....)).)))))))))))...)))))))))..

Structure

--         uuc       u    ccc  u 
  acugauuuc   uggugcu agag   gc g
  |||||||||   ||||||| ||||   ||  
  UGGCUAAAG   ACCACGA Ucuu   cg a
AU         UUU       -    --c  a 

Annotation confidence Not enough data

Genome context

JH419327.1: 412995-413055 [-]

Mature pny-miR-29a-3p

• Accession: MIMAT0042954
• Description: Pundamilia nyererei pny-miR-29a-3p mature miRNA
• Sequence: 40 - UAGCACCAUUUGAAAUCGGUUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381