Stem-loop pny-mir-456

Accession

MI0034945

Description

Pundamilia nyererei pny-mir-456 precursor miRNA

Sequence

ggcaggcaucuucccagccuacauguagauccaggaaucugCAGGCUGGUUAGAUGGUUGUCA
(((((.(((((..(((((((....((((((......)))))))))))))..))))).))))).

Structure

-     g     uc       acau      cc 
 ggcag caucu  ccagccu    guagau  a
 ||||| |||||  |||||||    ||||||   
 CUGUU GUAGA  GGUCGGA    Cgucua  g
A     G     UU       ----      ag 

Annotation confidence Not enough data

Genome context

JH419542.1: 185765-185827 [+]

Mature pny-miR-456

• Accession: MIMAT0042958
• Description: Pundamilia nyererei pny-miR-456 mature miRNA
• Sequence: 42 - CAGGCUGGUUAGAUGGUUGUCA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381