miRBase entry: pny-mir-155

Stem-loop pny-mir-155


Accession
MI0034951
Description
Pundamilia nyererei pny-mir-155 precursor miRNA


Sequence

932 reads, 82.0 reads per million, 7 experiments
UUAAUGCUAAUCGUGAUAGGGGUuguucuuauuaacagacaccuaacauguuagcauuagcu
((((((((((.((((.(((((..((((......))))..).)))).))))))))))))))..

Structure
--          U    A    - GU    cu 
  UUAAUGCUAA CGUG UAGG G  uguu  u
  |||||||||| |||| |||| |  ||||   
  gauuacgauu guac aucc c  acaa  a
uc          -    a    a ag    uu 


Annotation confidence Not enough data
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Genome context
JH419216.1: 2863542-2863603 [+]

Database links

Mature pny-miR-155-5p

Accession MIMAT0042961
Description Pundamilia nyererei pny-miR-155-5p mature miRNA
Sequence 1 - UUAAUGCUAAUCGUGAUAGGGGU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381