miRBase entry: pny-mir-133-3

Accession

MI0034965

Description

Pundamilia nyererei pny-mir-133-3 precursor miRNA

Sequence

agcugguaaaauggaaccaaaucaccucuugaauggaUUUGGUCCCCUUCAACCAGCU
(((((((..((.((.((((((((............)))))))).)).))..)))))))

Structure

       aa  u  a        accuc 
agcuggu  aa gg accaaauc     u
|||||||  || || ||||||||      
UCGACCA  UU CC UGGUUUag     u
       AC  C  C        guaag

Annotation confidence Not enough data

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Genome context

JH419326.1: 1863609-1863666 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-mir-133-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0042901
Description	Pundamilia nyererei pny-miR-133 mature miRNA
Sequence	38 - UUUGGUCCCCUUCAACCAGCU - 58
Evidence	experimental Illumina [1]

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381