Stem-loop pny-mir-29a-2

Accession

MI0034970

Description

Pundamilia nyererei pny-mir-29a-2 precursor miRNA

Sequence

22 reads, 2.0 reads per million, 5 experiments

accgauuucuuucgguguucagagucugcuucuguuucUAGCACCAUUUGAAAUCGGUUA
(((((((((....((((((.((((...((....))))))))))))....)))))))))..

Structure

--         uuuc      c    ucu  u 
  accgauuuc    gguguu agag   gc u
  |||||||||    |||||| ||||   ||  
  UGGCUAAAG    CCACGA Ucuu   ug c
AU         UUUA      -    ---  u 

Annotation confidence Not enough data

Genome context

JH419440.1: 754279-754338 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-mir-29a-2

Mature pny-miR-29a-3p

• Accession: MIMAT0042954
• Description: Pundamilia nyererei pny-miR-29a-3p mature miRNA
• Sequence: 39 - UAGCACCAUUUGAAAUCGGUUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381