Stem-loop pny-mir-29a-1

Accession

MI0034971

Description

Pundamilia nyererei pny-mir-29a-1 precursor miRNA

Sequence

26 reads, 3.0 reads per million, 5 experiments

accguuuuccucugguguucagaguuuccaucaugucUAGCACCAUUUGAAAUCGGUUA
((((.((((...(((((((.(((............))))))))))...)))).))))..

Structure

--    u    cuc       c   guuuc 
  accg uuuc   ugguguu aga     c
  |||| ||||   ||||||| |||      
  UGGC AAAG   ACCACGA Ucu     a
AU    U    UUU       -   guacu 

Annotation confidence Not enough data

Genome context

JH419239.1: 2111877-2111935 [+]

Mature pny-miR-29a-3p

• Accession: MIMAT0042954
• Description: Pundamilia nyererei pny-miR-29a-3p mature miRNA
• Sequence: 38 - UAGCACCAUUUGAAAUCGGUUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381