Stem-loop pny-mir-203-1

Accession

MI0034974

Description

Pundamilia nyererei pny-mir-203-1 precursor miRNA

Sequence

33278 reads, 2749.0 reads per million, 7 experiments

AGUGGUUCUCAACAGUUCAACAguucuuuaacaaaauugUGAAAUGUUUAGGACCACUUG
(((((((((.((((.((((.(((((.........))))))))).)))).)))))))))..

Structure

--         C    G    A     cuu 
  AGUGGUUCU AACA UUCA CAguu   u
  ||||||||| |||| |||| |||||   a
  UCACCAGGA UUGU AAGU guuaa   a
GU         U    A    -     aac 

Annotation confidence High

Genome context

JH419215.1: 6511561-6511620 [-]

Mature pny-miR-203-1-5p

• Accession: MIMAT0060387
• Description: Pundamilia nyererei pny-miR-203-1-5p mature miRNA
• Sequence: 1 - AGUGGUUCUCAACAGUUCAACA - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-203-3p

• Accession: MIMAT0042971
• Description: Pundamilia nyererei pny-miR-203-3p mature miRNA
• Sequence: 40 - UGAAAUGUUUAGGACCACUUG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381