Stem-loop pny-mir-137-1

Accession

MI0034988

Description

Pundamilia nyererei pny-mir-137-1 precursor miRNA

Sequence

358 reads, 28.0 reads per million, 7 experiments

ACGGGUAUUCUUGGGUUGAUAAUAcagauguggaugUUAUUGCUUGAGAAUACGCGUAG
(((.(((((((((((((((((.(((....)))..)))))..)))))))))))).)))..

Structure

--   G            --     -A   a 
  ACG GUAUUCUUGGGU  UGAUA  UAc g
  ||| ||||||||||||  |||||  |||  
  UGC CAUAAGAGUUCG  AUUgu  gug a
GA   G            UU     ag   u 

Annotation confidence High

Genome context

JH419439.1: 231022-231080 [-]

Mature pny-miR-137-5p

• Accession: MIMAT0060399
• Description: Pundamilia nyererei pny-miR-137-5p mature miRNA
• Sequence: 1 - ACGGGUAUUCUUGGGUUGAUAAUA - 24
• Evidence: experimental ; Illumina [1]

Mature pny-miR-137-3p

• Accession: MIMAT0042984
• Description: Pundamilia nyererei pny-miR-137-3p mature miRNA
• Sequence: 37 - UUAUUGCUUGAGAAUACGCGUAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381