Stem-loop pny-mir-137-2

Accession

MI0034989

Description

Pundamilia nyererei pny-mir-137-2 precursor miRNA

Sequence

364 reads, 29.0 reads per million, 7 experiments

ACGGGUAUUCUUGGGUUGAUAAUAcagaugucgaugUUAUUGCUUGAGAAUACGCGUAG
(((.((((((((((((.(((((((..(....)..))))))))))))))))))).)))..

Structure

--   G            U       ca a 
  ACG GUAUUCUUGGGU GAUAAUA  g u
  ||| |||||||||||| |||||||  |  
  UGC CAUAAGAGUUCG UUAUUgu  c g
GA   G            -       ag u 

Annotation confidence High

Genome context

JH419286.1: 2263550-2263608 [+]

Mature pny-miR-137-5p

• Accession: MIMAT0060399
• Description: Pundamilia nyererei pny-miR-137-5p mature miRNA
• Sequence: 1 - ACGGGUAUUCUUGGGUUGAUAAUA - 24
• Evidence: experimental ; Illumina [1]

Mature pny-miR-137-3p

• Accession: MIMAT0042984
• Description: Pundamilia nyererei pny-miR-137-3p mature miRNA
• Sequence: 37 - UUAUUGCUUGAGAAUACGCGUAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381