Stem-loop pny-mir-723a

Accession

MI0034997

Description

Pundamilia nyererei pny-mir-723a precursor miRNA

Sequence

163 reads, 13.0 reads per million, 7 experiments

cGGCAGCUUUGUGUGAUGUGACUUCugacauaucgaagaAGACAUCAGAUAAAUCUGUGCU
..((((.(((((.((((((..(((((..........))))))))))).))))).))))...

Structure

-cG    C     G      GA     gaca 
   GCAG UUUGU UGAUGU  CUUCu    u
   |||| ||||| ||||||  |||||     
   UGUC AAAUA ACUACA  GAaga    a
UCG    U     G      --     agcu 

Annotation confidence High

Genome context

JH419300.1: 1590102-1590162 [-]

Mature pny-miR-723a-5p

• Accession: MIMAT0060406
• Description: Pundamilia nyererei pny-miR-723a-5p mature miRNA
• Sequence: 2 - GGCAGCUUUGUGUGAUGUGACUUC - 25
• Evidence: experimental ; Illumina [1]

Mature pny-miR-723a-3p

• Accession: MIMAT0042992
• Description: Pundamilia nyererei pny-miR-723a-3p mature miRNA
• Sequence: 40 - AGACAUCAGAUAAAUCUGUGCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381