Stem-loop pny-mir-726

Accession

MI0035004

Description

Pundamilia nyererei pny-mir-726 precursor miRNA

Sequence

64 reads, 5.0 reads per million, 7 experiments

GGAAUUCCGCUAGUUCUGAACUAuucguguuugucaaaagUUCACUACUAGCAGAACUCAGA
.((.(((.((((((..((((((................))))))..)))))).))).))...

Structure

--G  A   C      UC      Auucgug 
   GA UUC GCUAGU  UGAACU       u
   || ||| ||||||  ||||||        
   CU AAG CGAUCA  ACUUga       u
AGA  C   A      UC      aaacugu 

Annotation confidence High

Genome context

JH419383.1: 28416-28477 [+]

Mature pny-miR-726-5p

• Accession: MIMAT0060408
• Description: Pundamilia nyererei pny-miR-726-5p mature miRNA
• Sequence: 1 - GGAAUUCCGCUAGUUCUGAACUA - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-726-3p

• Accession: MIMAT0042999
• Description: Pundamilia nyererei pny-miR-726-3p mature miRNA
• Sequence: 41 - UUCACUACUAGCAGAACUCAGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381