Stem-loop pny-mir-8160b

Accession

MI0035027

Description

Pundamilia nyererei pny-mir-8160b precursor miRNA

Sequence

578 reads, 41.0 reads per million, 7 experiments

AGAAUAAUGCCAGCAGUCGGCCgugaacucagugucaggccagugcugguguuauugaga
..(((((((((((((.(.((((.(((........)))))))).)))))))))))))....

Structure

--AG             G C    g   acu 
    AAUAAUGCCAGCA U GGCC uga   c
    ||||||||||||| | |||| |||    
    uuauuguggucgu a ccgg acu   a
agag             g -    -   gug 

Annotation confidence Not enough data

Genome context

JH419226.1: 4894511-4894570 [-]

Mature pny-miR-8160b-5p

• Accession: MIMAT0043024
• Description: Pundamilia nyererei pny-miR-8160b-5p mature miRNA
• Sequence: 1 - AGAAUAAUGCCAGCAGUCGGCC - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381