Stem-loop pny-mir-8159

Accession

MI0035032

Description

Pundamilia nyererei pny-mir-8159 precursor miRNA

Sequence

4845 reads, 405.0 reads per million, 7 experiments

UCAGUAACUGGAAUCUGUCCCUGCgugguaaaagugugcAGGGCCUGGCUGGUUACUGCACc
.((((((((((.....(.(((((((...........))))))).)...))))))))))....

Structure

---U          AAUCU U       uggu 
    CAGUAACUGG     G CCCUGCg    a
    ||||||||||     | |||||||    a
    GUCAUUGGUC     C GGGAcgu    a
cCAC          --GGU C       guga 

Annotation confidence High

Genome context

JH419269.1: 1411970-1412031 [-]

Mature pny-miR-8159-5p

• Accession: MIMAT0043029
• Description: Pundamilia nyererei pny-miR-8159-5p mature miRNA
• Sequence: 1 - UCAGUAACUGGAAUCUGUCCCUGC - 24
• Evidence: experimental ; Illumina [1]

Mature pny-miR-8159-3p

• Accession: MIMAT0060420
• Description: Pundamilia nyererei pny-miR-8159-3p mature miRNA
• Sequence: 40 - AGGGCCUGGCUGGUUACUGCAC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381