Stem-loop pny-mir-10549

Accession

MI0035033

Description

Pundamilia nyererei pny-mir-10549 precursor miRNA

Sequence

57 reads, 4.0 reads per million, 7 experiments

cccuguauugcugauuaccuuguggucuuccuguUAGGUAAUCAACAAUCCAGGAC
.((((.((((.(((((((((...((....))....))))))))).)))).))))..

Structure

-c    u    c         -ugu  u 
  ccug auug ugauuaccu    gg c
  |||| |||| |||||||||    ||  
  GGAC UAAC ACUAAUGGA    cc u
CA    C    A         Uugu  u 

Annotation confidence Not enough data

Genome context

JH419250.1: 2289537-2289592 [+]

Mature pny-miR-10549-3p

• Accession: MIMAT0043030
• Description: Pundamilia nyererei pny-miR-10549-3p mature miRNA
• Sequence: 35 - UAGGUAAUCAACAAUCCAGGAC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381