Stem-loop pny-mir-129-4

Accession

MI0035037

Description

Pundamilia nyererei pny-mir-129-4 precursor miRNA

Sequence

25493 reads, 2237.0 reads per million, 7 experiments

CUUUUUGCGGUCUGGGCUUGCuguuccuaaggcaguagccaggAAGCCCUUACCCCAAAAAGUAU
(((((((.(((..((((((.(((...(((......))).))).))))))..))).)))))))...

Structure

---       C   CU      G   uuc   ag 
   CUUUUUG GGU  GGGCUU Cug   cua  g
   ||||||| |||  |||||| |||   |||   
   GAAAAAC CCA  CCCGAA gac   gau  c
UAU       C   UU      g   --c   ga 

Annotation confidence High

Genome context

JH419257.1: 2623161-2623225 [+]

Mature pny-miR-129-5p

• Accession: MIMAT0042938
• Description: Pundamilia nyererei pny-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature pny-miR-129-4-3p

• Accession: MIMAT0060367
• Description: Pundamilia nyererei pny-miR-129-4-3p mature miRNA
• Sequence: 44 - AAGCCCUUACCCCAAAAAGUAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381