Stem-loop gmo-mir-152

Accession

MI0035985

Description

Gadus morhua gmo-mir-152 precursor miRNA

Sequence

AAGUUCUGUGAUACACUCGGACUgugaaucuaugcuagUCAGUGCAUAACAGAACUUUG
(((((((((.((.((((..((((((........)).)))))))).)).)))))))))..

Structure

--         G  A    CG    -  gaa 
  AAGUUCUGU AU CACU  GACU gu   u
  ||||||||| || ||||  |||| ||    
  UUCAAGACA UA GUGA  CUga cg   c
GU         A  C    --    u  uau 

Annotation confidence Not enough data

Genome context

CAEA01132255.1: 803-861 [-]

Mature gmo-miR-152-5p

• Accession: MIMAT0044018
• Description: Gadus morhua gmo-miR-152-5p mature miRNA
• Sequence: 1 - AAGUUCUGUGAUACACUCGGACU - 23
• Evidence: experimental ; SOLiD [1], Illumina [2]

Mature gmo-miR-152-3p

• Accession: MIMAT0044019
• Description: Gadus morhua gmo-miR-152-3p mature miRNA
• Sequence: 39 - UCAGUGCAUAACAGAACUUUG - 59
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305


2. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324