Stem-loop gmo-mir-26b

Accession

MI0036124

Description

Gadus morhua gmo-mir-26b precursor miRNA

Sequence

511401 reads, 11023.0 reads per million, 20 experiments

UUCAAGUAAUCCAGGAUAGGuuuguucugacaagcaguaaagCCUAUUCAGGAUGACUUGUUU
..(((((.((((.((((((((((...(((.....)))..)))))))))).)))).)))))...

Structure

-UU     A    A          guu   a 
   CAAGU AUCC GGAUAGGuuu   cug c
   ||||| |||| ||||||||||   ||| a
   GUUCA UAGG CUUAUCCgaa   gac a
UUU     G    A          -au   g 

Annotation confidence High

Genome context

HE571522.1: 39027-39089 [+]

Mature gmo-miR-26b-5p

• Accession: MIMAT0044207
• Description: Gadus morhua gmo-miR-26b-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGG - 20
• Evidence: experimental ; SOLiD [1], Illumina [2]

Mature gmo-miR-26b-3p

• Accession: MIMAT0060455
• Description: Gadus morhua gmo-miR-26b-3p mature miRNA
• Sequence: 43 - CCUAUUCAGGAUGACUUGUUU - 63
• Evidence: experimental ; SOLiD [1], Illumina [2]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305


2. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324