Stem-loop gmo-mir-194b

Accession

MI0036145

Description

Gadus morhua gmo-mir-194b precursor miRNA

Sequence

UGUAACAGCAUCUCCAUAUGGAUgagugucugguguccaguggagcugcuguuau
.(((((((((.((((((.(((((...........))))))))))).)))))))))

Structure

U         U      A     gagu 
 GUAACAGCA CUCCAU UGGAU    g
 ||||||||| |||||| |||||    u
 uauugucgu gaggug accug    c
-         c      -     uggu 

Annotation confidence Low

Genome context

HE571897.1: 178583-178637 [+]

Mature gmo-miR-194b-5p

• Accession: MIMAT0044233
• Description: Gadus morhua gmo-miR-194b-5p mature miRNA
• Sequence: 1 - UGUAACAGCAUCUCCAUAUGGAU - 23
• Evidence: experimental ; SOLiD [1], Illumina [2]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305


2. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324