Stem-loop gmo-mir-8160a

Accession

MI0036246

Description

Gadus morhua gmo-mir-8160a precursor miRNA

Sequence

AGAAUAAUGCCAGCAGUCGGUcagcguguagcagagaCCCACCCUGGUGUUAUUAGGA
..(((((((((((..((.((((.((.....))...)))).)).)))))))))))....

Structure

--AG           CA  C    --a  g 
    AAUAAUGCCAG  GU GGUc   gc u
    |||||||||||  || ||||   || g
    UUAUUGUGGUC  CA CCag   cg u
AGGA           -C  C    aga  a 

Annotation confidence Not enough data

Genome context

CAEA01218051.1: 258-315 [+]

Mature gmo-miR-8160a-5p

• Accession: MIMAT0044357
• Description: Gadus morhua gmo-miR-8160a-5p mature miRNA
• Sequence: 1 - AGAAUAAUGCCAGCAGUCGGU - 21
• Evidence: experimental ; SOLiD [1], Illumina [2]

Mature gmo-miR-8160a-3p

• Accession: MIMAT0044358
• Description: Gadus morhua gmo-miR-8160a-3p mature miRNA
• Sequence: 38 - CCCACCCUGGUGUUAUUAGGA - 58
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305


2. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324