Stem-loop pab-MIR156d

Accession

MI0036564

Description

Picea abies pab-MIR156d precursor miRNA

Literature search

2 open access papers mention pab-MIR156d
(7 sentences)

Sequence

gaggaucUGACAGAAGAGAGUGGGCACagauagcccuaacauugcuuguguguggagcgaugcgugcccaccaucucuuucagucagcucuc
..(((.(((((.(((((((((((((((..((.((((..((((.....))))..)).)).))..))))))))..)))))))..))))).))).

Structure

ga   u     -A       --        ag  a  -  ua    u 
  gga cUGAC  GAAGAGA  GUGGGCAC  au gc cc  acau g
  ||| |||||  |||||||  ||||||||  || || ||  |||| c
  ucu gacug  uuucucu  cacccgug  ua cg gg  ugug u
-c   c     ac       ac        cg  g  a  ug    u 

Annotation confidence Not enough data

Genome context

MA_20433: 5527-5618 [+]

Mature pab-miR156d

• Accession: MIMAT0044662
• Description: Picea abies pab-miR156d mature miRNA
• Sequence: 8 - UGACAGAAGAGAGUGGGCAC - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918