Stem-loop pab-MIR156p

Accession

MI0036575

Description

Picea abies pab-MIR156p precursor miRNA

Literature search

2 open access papers mention pab-MIR156p
(7 sentences)

Sequence

uauguguuuuuuucucagucuaauuaacuugcggguauguguucacguaaugguggaaagcagaagaaggugaucauguugUUGACAGAAGAUAGAGGGCACaug
((((((((((((((((.(((....((((((((.....(((.(((((......)))))..))).......))))....))))..))).).))).))))))))))))

Structure

            -   - a   uaau    ----    --gggua   -g     gu 
uauguguuuuuu ucu c guc    uaac    uugc       ugu  uucac  a
|||||||||||| ||| | |||    ||||    ||||       |||  |||||   
guaCACGGGAGA AGA G CAG    guug    agug       acg  aggug  a
            U   A A   --UU    uacu    gaagaag   aa     gu 

Annotation confidence Not enough data

Genome context

MA_733025: 1023-1127 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pab-MIR156p

Mature pab-miR156p

• Accession: MIMAT0044673
• Description: Picea abies pab-miR156p mature miRNA
• Sequence: 82 - UUGACAGAAGAUAGAGGGCAC - 102
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918