Stem-loop pab-MIR156v

Accession

MI0036581

Description

Picea abies pab-MIR156v precursor miRNA

Literature search

2 open access papers mention pab-MIR156v
(7 sentences)

Sequence

2522 reads, 228.0 reads per million, 75 experiments

auguugUUGACAGAAGAUAGAGGGCACaugcgcuuacuuucagagaaucugcaauugagggacauguGCCUUCUAUUCUUCUGCCAGCCcau
.....((((.(((((((((((((((((((((.((((.((.((((...)))).)).)))).).))))))))))))).))))))).))))....

Structure

auguu    A       -             - g    c  u    g 
     gUUG CAGAAGA UAGAGGGCACaug c cuua uu caga  
     |||| ||||||| ||||||||||||| | |||| || |||| a
     CGAC GUCUUCU AUCUUCCGuguac g gagu aa gucu  
-uacC    C       U             a g    u  c    a 

Annotation confidence High

Genome context

MA_95243: 23015-23106 [-]

Mature pab-miR156v-5p

• Accession: MIMAT0044679
• Description: Picea abies pab-miR156v-5p mature miRNA
• Sequence: 7 - UUGACAGAAGAUAGAGGGCAC - 27
• Evidence: experimental ; Illumina [1]

Mature pab-miR156v-3p

• Accession: MIMAT0057454
• Description: Picea abies pab-miR156v-3p mature miRNA
• Sequence: 68 - GCCUUCUAUUCUUCUGCCAGCC - 89
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918