Stem-loop pab-MIR156y

Accession

MI0036584

Description

Picea abies pab-MIR156y precursor miRNA

Literature search

2 open access papers mention pab-MIR156y
(7 sentences)

Sequence

1805 reads, 153.0 reads per million, 42 experiments

ugcUGACAGGAGAUAGAGAGCACaugcgcucacaugcagaggcucugcguuugaggugcauguGCUCUCUAUGCUUCUGUCGUCa
((.(((((((((((((((((((((((((((((.(((((((...))))))).))).))))))))))))))))).))))))))).))

Structure

  c         -                 -   c       g 
ug UGACAGGAG AUAGAGAGCACaugcgc uca augcaga  
|| ||||||||| ||||||||||||||||| ||| ||||||| g
aC GCUGUCUUC UAUCUCUCGuguacgug agu ugcgucu  
  U         G                 g   u       c 

Annotation confidence High

Genome context

MA_141025: 3267-3351 [-]

Mature pab-miR156y-5p

• Accession: MIMAT0044682
• Description: Picea abies pab-miR156y-5p mature miRNA
• Sequence: 4 - UGACAGGAGAUAGAGAGCAC - 23
• Evidence: experimental ; Illumina [1]

Mature pab-miR156y-3p

• Accession: MIMAT0057456
• Description: Picea abies pab-miR156y-3p mature miRNA
• Sequence: 64 - GCUCUCUAUGCUUCUGUCGUC - 84
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918