Stem-loop pab-MIR159e

Accession

MI0036591

Description

Picea abies pab-MIR159e precursor miRNA

Literature search

2 open access papers mention pab-MIR159e
(6 sentences)

Sequence

gggugcucacuucaguccaaccagggguuguauggggaugauucaacuacugguucauggauucuauugucuugucauguugguggagcuagaaauauaauggugugcaugagacaggagguguauuuccaccaugcgacuuuuaCUUGGAUUCAAGGGAGCUCCU
(((.((((.(((.(((((((..((((((((((((((((.(((.((.((.(((..(((((.((.(((((((....((..(((.....)))..))...))))))).)).)))))..))).)).)).)))))).)))))))))))))..))))))).))).)))).)))

Structure

   u    a   c       cc             -   u   u  a  a   gu     g  u       cuug  au   g 
ggg gcuc cuu aguccaa  agggguuguaugg gga gau ca cu cug  ucaug au cuauugu    uc  guu g
||| |||| ||| |||||||  ||||||||||||| ||| ||| || || |||  ||||| || |||||||    ||  ||| u
UCC CGAG GAA UUAGGUU  uuuucagcguacc ccu uua gu ga gac  aguac ug gguaaua    ag  cga g
   U    G   C       Ca             a   -   u  g  g   ag     g  u       -uaa  au   g 

Annotation confidence Not enough data

Genome context

MA_820781: 3384-3549 [-]

Mature pab-miR159e

• Accession: MIMAT0044689
• Description: Picea abies pab-miR159e mature miRNA
• Sequence: 146 - CUUGGAUUCAAGGGAGCUCCU - 166
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918