Stem-loop pab-MIR160d

Accession

MI0036593

Description

Picea abies pab-MIR160d precursor miRNA

Literature search

1 open access papers mention pab-MIR160d
(1 sentences)

Sequence

gguagagugUGCCUGGCUCCCUGUAUGCCAcuuacaaaucuaauccucauuggauuggcuuuauagguggcgugcagggagacaagcacacuuucu
((.(((((((((.((.((((((((((((((((((.(((.(((((((.....))))))).))).)))))))))))))))))).)).)))))))))))

Structure

  u         C  G                  c   u       u 
gg agagugUGC UG CUCCCUGUAUGCCAcuua aaa cuaaucc c
|| ||||||||| || |||||||||||||||||| ||| ||||||| a
uc uuucacacg ac gagggacgugcgguggau uuu gguuagg u
  -         a  a                  a   c       u 

Annotation confidence Not enough data

Genome context

MA_532021: 1527-1622 [-]

Mature pab-miR160d

• Accession: MIMAT0044691
• Description: Picea abies pab-miR160d mature miRNA
• Sequence: 10 - UGCCUGGCUCCCUGUAUGCCA - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918