Stem-loop pab-MIR164b

Accession

MI0036600

Description

Picea abies pab-MIR164b precursor miRNA

Sequence

29832 reads, 974.0 reads per million, 63 experiments

auagggagggcuauacaugcUGGAGAAGCAGGGCACGUGCGaggcagucugugaugggcuacugccgaugCAUGUGCUCUUUUUCUCCAUCauggaauacccaccuau
(((((..(((.(((.((((.((((((((.((((((((((((.((((((..((.....)).))))))..)))))))))))).)))))))).))))..)))))).)))))

Structure

     ga   c   -a    c        C            -a      cu  g 
auagg  ggg uau  caug UGGAGAAG AGGGCACGUGCG  ggcagu  gu a
|||||  ||| |||  |||| |||||||| ||||||||||||  ||||||  || u
uaucc  ccc aua  guaC ACCUCUUU UCUCGUGUACgu  ccguca  cg g
     -a   -   ag    U        U            ag      -u  g 

Annotation confidence High

Genome context

MA_61906: 2587-2694 [-]

Mature pab-miR164b-5p

• Accession: MIMAT0057468
• Description: Picea abies pab-miR164b-5p mature miRNA
• Sequence: 21 - UGGAGAAGCAGGGCACGUGCG - 41
• Evidence: experimental ; unknown

Mature pab-miR164b-3p

• Accession: MIMAT0044698
• Description: Picea abies pab-miR164b-3p mature miRNA
• Sequence: 71 - CAUGUGCUCUUUUUCUCCAUC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918