Stem-loop pab-MIR166c

Accession

MI0036601

Description

Picea abies pab-MIR166c precursor miRNA

Literature search

1 open access papers mention pab-MIR166c
(3 sentences)

Sequence

guguauauaguuuuguuugagugCCGGACCAGGCUUCAUCCCCUucaacaauacucuuugaauuuuacuggggauacucuuugaguaagugguaggagggaggaggagaagguuuaaacuuuaaacguaggucugauauac
((((((.(((((((((((((((...(((((...((((.((((((((.((..(((((...(((((((....)))))..))...)))))....)).)))))).)).))))..)))))..)).))))))).))).)))))))))

Structure

      a   -   -       -  gCC     AGG    A  -      a  --aa     uuu  --     a 
guguau uag uuu uguuuga gu   GGACC   CUUC UC CCCUuc ac    uacuc   ga  auuuu c
|||||| ||| ||| ||||||| ||   |||||   |||| || |||||| ||    |||||   ||  |||||  
cauaua guc gga gcaaauu ca   uuugg   gagg gg gggagg ug    augag   cu  uaggg u
      -   u   u       u  -aa     -aa    a  a      a  guga     uuu  ca     g 

Annotation confidence Not enough data

Genome context

MA_52831: 28394-28534 [-]

Mature pab-miR166c

• Accession: MIMAT0044699
• Description: Picea abies pab-miR166c mature miRNA
• Sequence: 24 - CCGGACCAGGCUUCAUCCCCU - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918