Stem-loop pab-MIR166i

Accession

MI0036607

Description

Picea abies pab-MIR166i precursor miRNA

Literature search

1 open access papers mention pab-MIR166i
(3 sentences)

Sequence

3387108 reads, 126662.0 reads per million, 102 experiments

agagucccugaucuguggGGAAUGCAGCCUGGUUCGAGGgcguuauagaggaucuuauagaacuugucUCGGACCAGGCUUCAUUCCCCucaaucagacucu
((((((..((((.((.((((((((.((((((((((((((...((((((......))))))......)))))))))))))).)))))))).))))))))))))

Structure

      cc    c  u        C              ---gcg      ag 
agaguc  ugau ug ggGGAAUG AGCCUGGUUCGAGG      uuauag  g
||||||  |||| || |||||||| ||||||||||||||      ||||||   
ucucag  acua ac CCCCUUAC UCGGACCAGGCUcu      gauauu  a
      --    -  u        U              guucaa      cu 

Annotation confidence High

Genome context

MA_34138: 13441-13542 [-]

Mature pab-miR166i-5p

• Accession: MIMAT0057473
• Description: Picea abies pab-miR166i-5p mature miRNA
• Sequence: 19 - GGAAUGCAGCCUGGUUCGAGG - 39
• Evidence: experimental ; unknown

Mature pab-miR166i-3p

• Accession: MIMAT0044705
• Description: Picea abies pab-miR166i-3p mature miRNA
• Sequence: 69 - UCGGACCAGGCUUCAUUCCCC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918