Stem-loop pab-MIR168a

Accession

MI0036611

Description

Picea abies pab-MIR168a precursor miRNA

Sequence

11288 reads, 557.0 reads per million, 102 experiments

guuauucguggcucgaauUCGCUUGGUGCAGGUCGGGAAcacucuugucuuacugcguacagugauaauaaccuagaaccuagaacagacugaaaucuaugcauaucagggcaaaacuguuCCCCACAUGCAUCAACUGAAUcggagccgcugguaau
((((((.(((((((..(((((.((((((((.((.(((((((...(((((((..((((((((((.........((((...)))).....)))).....))))))....)))))))...))))))).)).)))))))).)))))..))))))).))))))

Structure

      c       ga     C        G  C       cuc       --ac      -----    gauaauaac    a 
guuauu guggcuc  auUCG UUGGUGCA GU GGGAAca   uugucuu    ugcgua     cagu         cuag  
|||||| |||||||  ||||| |||||||| || |||||||   |||||||    ||||||     ||||         |||| a
uaaugg cgccgag  UAAGU AACUACGU CA CCCuugu   aacggga    acguau     guca         gauc  
      u       gc     C        A  C       caa       cuau      cuaaa    ----gacaa    c 

Annotation confidence High

Genome context

MA_767841: 3854-4011 [-]

Mature pab-miR168a-5p

• Accession: MIMAT0044709
• Description: Picea abies pab-miR168a-5p mature miRNA
• Sequence: 19 - UCGCUUGGUGCAGGUCGGGAA - 39
• Evidence: experimental ; Illumina [1]

Mature pab-miR168a-3p

• Accession: MIMAT0057477
• Description: Picea abies pab-miR168a-3p mature miRNA
• Sequence: 122 - CCCCACAUGCAUCAACUGAAU - 142
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918