Stem-loop pab-MIR169c

Accession

MI0036615

Description

Picea abies pab-MIR169c precursor miRNA

Sequence

gcaugucgaggcagauagccauacUCAGCCAAGAAUGACUUGCCCgcauacuguuaugaaguauuguuccacaugcgcauuucaguccugcggguagguuauucuuggcaaagcaucgcuaucuccuuuuucaugc
(((((..((((.(((((((.((.((..(((((((((((((((((((((.((((..(((..((((........)))).)))..))))..)))))))))))))))))))))..)).)).)))))))))))...)))))

Structure

     -uc    c       c  a  CA                     -u    uu   aa    ugu 
gcaug   gagg agauagc au cU  GCCAAGAAUGACUUGCCCgca  acug  aug  guau   u
|||||   |||| ||||||| || ||  |||||||||||||||||||||  ||||  |||  ||||    
cguac   uucc ucuaucg ua ga  cgguucuuauuggaugggcgu  ugac  uac  cgua   c
     uuu    -       c  c  aa                     cc    uu   -g    cac 

Annotation confidence Not enough data

Genome context

MA_8387092: 2400-2535 [+]

Mature pab-miR169c

• Accession: MIMAT0044713
• Description: Picea abies pab-miR169c mature miRNA
• Sequence: 25 - UCAGCCAAGAAUGACUUGCCC - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918