Stem-loop pab-MIR171b

Accession

MI0036619

Description

Picea abies pab-MIR171b precursor miRNA

Literature search

1 open access papers mention pab-MIR171b
(1 sentences)

Sequence

augaugaaagagauauuggggcgguucaaucccaugacgcaauuacagugcagguguaaugcgaucucggaUUGAGCCGCGCCAAUAUCACUuuucgacucaucau
((((((((((.((((((((.((((((((((((...((((((.(((((.......))))))))).))..)))))))))))).)))))))).)))......)))))))

Structure

       ------   a        g            cau  -    a     gu 
augauga      aag gauauugg gcgguucaaucc   ga cgca uuaca  g
|||||||      ||| |||||||| ||||||||||||   || |||| |||||  c
uacuacu      uUC CUAUAACC CGCCGAGUUagg   cu gcgu aaugu  a
       cagcuu   A        G            -cu  a    -     gg 

Annotation confidence Not enough data

Genome context

MA_76927: 7902-8007 [-]

Mature pab-miR171b

• Accession: MIMAT0044717
• Description: Picea abies pab-miR171b mature miRNA
• Sequence: 72 - UUGAGCCGCGCCAAUAUCACU - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918