Stem-loop pab-MIR171c

Accession

MI0036620

Description

Picea abies pab-MIR171c precursor miRNA

Literature search

1 open access papers mention pab-MIR171c
(1 sentences)

Sequence

gggaaagagaugcuggugcgguucaauccgaagauagcauuacaacaugaauguaaugucgucucagaUUGAGCCGCGCCAAUAUCACUuuucu
(((((((.((((.(((((((((((((((.((.(((.((((((((.......)))))))).))))).))))))))))))))).)))).)))))))

Structure

       a    c               c  a   a        ac 
gggaaag gaug uggugcgguucaauc ga gau gcauuaca  a
||||||| |||| ||||||||||||||| || ||| ||||||||  u
ucuuuUC CUAU ACCGCGCCGAGUUag cu cug uguaaugu  g
       A    A               a  -   c        aa 

Annotation confidence Not enough data

Genome context

MA_8858341: 2392-2485 [-]

Mature pab-miR171c

• Accession: MIMAT0044718
• Description: Picea abies pab-miR171c mature miRNA
• Sequence: 69 - UUGAGCCGCGCCAAUAUCACU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918