Stem-loop pab-MIR319b

Accession

MI0036624

Description

Picea abies pab-MIR319b precursor miRNA

Literature search

1 open access papers mention pab-MIR319b
(3 sentences)

Sequence

ggggagcuuccuucacuucaauagaaagacaacaaggagaaugaucagaugccgccucaugugucugacuauucugucuuuucuuggcuuaaacagacagauuagccaaaugcuugaugcgggaccugcuguucuucuuuuucuugucauucuUUGGACUGAAGGGAGCUCCCc
(((((((((((((((.(((((.((((.(((((.((((((((.((((((.(.((((.(((.((((.((.(((.((((((((((........))).))))))).))).)).)))).))).)))).).)))..))).)))))))).))))).))))))))).)))))))))))))))

Structure

               c     u    a     c        u   --   a g    c   u    c  a   u       -   cuu 
ggggagcuuccuuca uucaa agaa gacaa aaggagaa gau  cag u ccgc uca gugu ug cua ucugucu uuu   g
||||||||||||||| ||||| |||| ||||| |||||||| |||  ||| | |||| ||| |||| || ||| ||||||| |||    
cCCCUCGAGGGAAGU AGGUU ucuu cuguu uuuuucuu uug  guc a ggcg agu cgua ac gau agacaga aaa   g
               C     -    a     c        c   uc   c g    u   u    a  c   u       c   uuc 

Annotation confidence Not enough data

Genome context

MA_103876: 14953-15126 [-]

Mature pab-miR319b

• Accession: MIMAT0044722
• Description: Picea abies pab-miR319b mature miRNA
• Sequence: 154 - UUGGACUGAAGGGAGCUCCC - 173
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918