Stem-loop pab-MIR319g

Accession

MI0036629

Description

Picea abies pab-MIR319g precursor miRNA

Literature search

1 open access papers mention pab-MIR319g
(3 sentences)

Sequence

ggcucuguguggggaguuccauucaguucaaucaugggugcaaagaaguggaugcagcugccacuucaugcaucugacuagacuauugugugcguuuauuauaauagcuuagucccaugcuugaugcgggagcugauucuaucgcuuccuccgucccucgaUUGGACUGAAGGGAGCUCCCcacucacucugguu
.....((.((((((((((((.((((((((((((..(((......((((((((..(((((.((.(.(((.((((..((((((.((((((((.........)))))))).))))))..)))).))).).)).)))))..))...))))))......)))..)))))))))))).)))))))))))).))........

Structure

---ggcuc  u            a            au   ugcaaa      ---  ug     g  a u   u    cu      a        ugc 
        ug guggggaguucc uucaguucaauc  ggg      gaagug   ga  cagcu cc c uca gcau  gacuag cuauugug   g
        || |||||||||||| ||||||||||||  |||      ||||||   ||  ||||| || | ||| ||||  |||||| ||||||||   u
        ac cacCCCUCGAGG AAGUCAGGUUag  ccc      cuucgc   cu  gucga gg g agu cgua  cugauu gauaauau   u
uuggucuc  u            G            cu   ugccuc      uau  ua     g  c u   u    cc      c        uau 

Annotation confidence Not enough data

Genome context

MA_65226: 6558-6752 [-]

Mature pab-miR319g

• Accession: MIMAT0044727
• Description: Picea abies pab-miR319g mature miRNA
• Sequence: 162 - UUGGACUGAAGGGAGCUCCC - 181
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918