Stem-loop pab-MIR319h

Accession

MI0036630

Description

Picea abies pab-MIR319h precursor miRNA

Literature search

1 open access papers mention pab-MIR319h
(3 sentences)

Sequence

cggggagcucccuucaagccaaauaaaaacaccguaagggcaaucuaacuccugugucaugcacaccauuaucuugagaccaaaaccguuucucgagcauugcaagacaauagaguccaggaaccagcaguugaaucauccccacguggcccuuggUUGGACUGAAGGGAGCGCCCcg
(((((.((((((((((..((((.........((....))........((((...((((.((((.......(((((((((...........))))))).)))))).))))...))))(((((..(((......((....))......)))..)))))))))..)))))))))).)))))

Structure

     a          ag    ---------------auaaaaacaccguaagggcaaucua    cug    a    caccauu  -       ccaa 
cgggg gcucccuuca  ccaa                                        acuc   uguc ugca       au cuugaga    a
||||| ||||||||||  ||||                                        ||||   |||| ||||       || |||||||    a
gcCCC CGAGGGAAGU  GGUU                                        ugag   acag acgu       ua gagcucu    c
     G          CA    gguucccggugcaccccuacuaaguugacgaccaaggacc    aua    a    -------  c       uugc 

Annotation confidence Not enough data

Genome context

MA_8300140: 1593-1770 [-]

Mature pab-miR319h

• Accession: MIMAT0044728
• Description: Picea abies pab-miR319h mature miRNA
• Sequence: 157 - UUGGACUGAAGGGAGCGCCC - 176
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918