Stem-loop pab-MIR393a

Accession

MI0036634

Description

Picea abies pab-MIR393a precursor miRNA

Sequence

uucuugcaaacuggauaauUCCAAAGGGAUUGCAUUGAUUCaucauaaaaacagcggcugcuggacgaugaugagucaugcauucucuucggaauccuccaguaugaagaa
.((((.((.((((((..(((((.((((((.(((((.((((((((((.....((((....))))....))))))))))))))).)))))).)))))..)))))).)))))).

Structure

u    g  a      ua     A      U     U          aaaaa    g 
 ucuu ca acugga  auUCC AAGGGA UGCAU GAUUCaucau     cagc g
 |||| || ||||||  ||||| |||||| ||||| ||||||||||     ||||  
 agaa gu ugaccu  uaagg uucucu acgua cugaguagua     gucg c
a    -  a      cc     c      u     -          -gcag    u 

Annotation confidence Not enough data

Genome context

MA_10115581: 1909-2019 [+]

Mature pab-miR393a

• Accession: MIMAT0044732
• Description: Picea abies pab-miR393a mature miRNA
• Sequence: 20 - UCCAAAGGGAUUGCAUUGAUUC - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918