Stem-loop pab-MIR394a

Accession

MI0036638

Description

Picea abies pab-MIR394a precursor miRNA

Literature search

1 open access papers mention pab-MIR394a
(1 sentences)

Sequence

gccauaaaacuccuuucagagaguaCUGGCAUUCUGUCCACCUCCauaugcucugccagaaucacacucgcagcuuuuauggaggcggacuauuugccaagcaagcucugccaggcguuuuucggc
(((..(((((.(((..(((((..(.((((((....((((.((((((((....((((.((.......)).))))....)))))))).))))....)))).)).)..)))))..))).)))))..)))

Structure

   au     u   uu     ag a  -    UUCU    A        ugcu    c  aa 
gcc  aaaac ccu  cagag  u CU GGCA    GUCC CCUCCaua    cugc ag  u
|||  ||||| |||  |||||  | || ||||    |||| ||||||||    |||| ||  c
cgg  uuuug gga  gucuc  a ga ccgu    cagg ggagguau    gacg uc  a
   cu     c   cc     ga c  a    uuau    c        uuuc    c  ac 

Annotation confidence Not enough data

Genome context

MA_125535: 8010-8135 [+]

Mature pab-miR394a

• Accession: MIMAT0044736
• Description: Picea abies pab-miR394a mature miRNA
• Sequence: 26 - CUGGCAUUCUGUCCACCUCC - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918