Stem-loop pab-MIR395b

Accession

MI0036642

Description

Picea abies pab-MIR395b precursor miRNA

Sequence

3965 reads, 192.0 reads per million, 46 experiments

guuuaaugcuccuggaGUUCUCCCAAACACUUCAGUGaacagaucccuagggaauucaCAGAAGUGUUUGGGGGGACUCugggaaucguugaac
((((((((.((((((((((((((((((((((((.(((((....(((....))).))))).))))))))))))))))))))))))..))))))))

Structure

        -c                        A     caga   c 
guuuaaug  uccuggaGUUCUCCCAAACACUUC GUGaa    ucc u
||||||||  |||||||||||||||||||||||| |||||    |||  
caaguugc  aggguCUCAGGGGGGUUUGUGAAG Cacuu    agg a
        ua                        A     ---a   g 

Annotation confidence High

Genome context

MA_411836: 4115-4208 [-]

Mature pab-miR395b-5p

• Accession: MIMAT0057494
• Description: Picea abies pab-miR395b-5p mature miRNA
• Sequence: 17 - GUUCUCCCAAACACUUCAGUG - 37
• Evidence: experimental ; unknown

Mature pab-miR395b-3p

• Accession: MIMAT0044740
• Description: Picea abies pab-miR395b-3p mature miRNA
• Sequence: 59 - CAGAAGUGUUUGGGGGGACUC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918