Stem-loop pab-MIR395c

Accession

MI0036643

Description

Picea abies pab-MIR395c precursor miRNA

Sequence

2675 reads, 121.0 reads per million, 41 experiments

guucagaucuccuggaGUUCCCUCAAACACUUCAGUGaaguagugaaugaaucaucacuauccCAGAAGUGUUUGGGGGGACUCugggaguccuugaac
((((((..(((((((((((((((((((((((((..((..(((((((........)))))))..)))))))))))))))))))))))))))..).)))))

Structure

     - au                         AG  aa       aug 
guuca g  cuccuggaGUUCCCUCAAACACUUC  UG  guaguga   a
||||| |  |||||||||||||||||||||||||  ||  |||||||    
caagu c  gaggguCUCAGGGGGGUUUGUGAAG  AC  uaucacu   a
     u cu                         --  cc       acu 

Annotation confidence High

Genome context

MA_460099: 3202-3300 [-]

Mature pab-miR395c-5p

• Accession: MIMAT0057495
• Description: Picea abies pab-miR395c-5p mature miRNA
• Sequence: 17 - GUUCCCUCAAACACUUCAGUG - 37
• Evidence: experimental ; unknown

Mature pab-miR395c-3p

• Accession: MIMAT0044741
• Description: Picea abies pab-miR395c-3p mature miRNA
• Sequence: 64 - CAGAAGUGUUUGGGGGGACUC - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918