Stem-loop pab-MIR395d

Accession

MI0036644

Description

Picea abies pab-MIR395d precursor miRNA

Sequence

2832 reads, 124.0 reads per million, 42 experiments

cuuguuuaacgcuccuggaAUUCUCCCAAACACUUCGGUGaacagcucucuaggguaauuccCAGAAGUGUUUGGGGGGACUCugggaaucguugaacucag
...((((((((.(((((((.((((((((((((((((((.(((..((((....))))..))))).)))))))))))))))).)))))))..))))))))....

Structure

-cuu        -c       A                -  U   ca    u 
    guuuaacg  uccugga UUCUCCCAAACACUUC GG Gaa  gcuc c
    ||||||||  ||||||| |||||||||||||||| || |||  ||||  
    caaguugc  aggguCU AGGGGGGUUUGUGAAG Cc cuu  uggg u
gacu        ua       C                A  -   aa    a 

Annotation confidence High

Genome context

MA_640891: 3044-3145 [-]

Mature pab-miR395d-5p

• Accession: MIMAT0057496
• Description: Picea abies pab-miR395d-5p mature miRNA
• Sequence: 20 - AUUCUCCCAAACACUUCGGUG - 40
• Evidence: experimental ; unknown

Mature pab-miR395d-3p

• Accession: MIMAT0044742
• Description: Picea abies pab-miR395d-3p mature miRNA
• Sequence: 63 - CAGAAGUGUUUGGGGGGACUC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918