Stem-loop pab-MIR395f

Accession

MI0036646

Description

Picea abies pab-MIR395f precursor miRNA

Sequence

2154 reads, 97.0 reads per million, 53 experiments

uuaacgcuccuggaGUUCUCCCAGACACUUCGGUGaacagcuuccuuggguaauuccCAGAAGUGUUUGGGUGGACUCugggaaucguuga
((((((.(((((((((((.((((((((((((((.(((..((((....))))..))))).)))))))))))).)))))))))))..))))))

Structure

      -c           U            -  U   ca    c 
uuaacg  uccuggaGUUC CCCAGACACUUC GG Gaa  gcuu c
||||||  ||||||||||| |||||||||||| || |||  ||||  
aguugc  aggguCUCAGG GGGUUUGUGAAG Cc cuu  uggg u
      ua           U            A  -   aa    u 

Annotation confidence High

Genome context

MA_72088: 12322-12412 [-]

Mature pab-miR395f-5p

• Accession: MIMAT0057497
• Description: Picea abies pab-miR395f-5p mature miRNA
• Sequence: 15 - GUUCUCCCAGACACUUCGGUG - 35
• Evidence: experimental ; unknown

Mature pab-miR395f-3p

• Accession: MIMAT0044744
• Description: Picea abies pab-miR395f-3p mature miRNA
• Sequence: 58 - CAGAAGUGUUUGGGUGGACUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918