Stem-loop pab-MIR395h

Accession

MI0036648

Description

Picea abies pab-MIR395h precursor miRNA

Sequence

2153 reads, 95.0 reads per million, 54 experiments

guuuaacgcuccuggaGUUCUCCCAGACACUUCGGUGaagagccuccuugguuaauuccCAGAAGUGUUUGGGUGGACUCugggaaucguugaac
((((((((.(((((((((((.((((((((((((((.(((.((((.....))))..))))).)))))))))))).)))))))))))..))))))))

Structure

        -c           U            -  U   -g    u 
guuuaacg  uccuggaGUUC CCCAGACACUUC GG Gaa  agcc c
||||||||  ||||||||||| |||||||||||| || |||  |||| c
caaguugc  aggguCUCAGG GGGUUUGUGAAG Cc cuu  uugg u
        ua           U            A  -   aa    u 

Annotation confidence High

Genome context

MA_9871317: 1111-1205 [-]

Mature pab-miR395h-5p

• Accession: MIMAT0057498
• Description: Picea abies pab-miR395h-5p mature miRNA
• Sequence: 17 - GUUCUCCCAGACACUUCGGUG - 37
• Evidence: experimental ; unknown

Mature pab-miR395h-3p

• Accession: MIMAT0044746
• Description: Picea abies pab-miR395h-3p mature miRNA
• Sequence: 60 - CAGAAGUGUUUGGGUGGACUC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918