Stem-loop pab-MIR396d

Accession

MI0036650

Description

Picea abies pab-MIR396d precursor miRNA

Literature search

1 open access papers mention pab-MIR396d
(5 sentences)

Sequence

gaguccuuucauauuuucccacugcuuucuugaacuugauuuguugucuguauguggaucuauaucuauggaaaagCUCAAGAAAGCUGUGGGAAAacaugaaacgaguc
((.((.((((((.(((((((((.((((((((((.((((((.....))).....((((((....))))))....))).)))))))))).))))))))).)))))).)).))

Structure

  g  c      a         u          a   gauuuguugucuguau      c 
ga uc uuucau uuuucccac gcuuucuuga cuu                guggau u
|| || |||||| ||||||||| |||||||||| |||                ||||||  
cu ag aaagua aAAAGGGUG CGAAAGAACU gaa                uaucua a
  g  c      c         U          C   ------------aagg      u 

Annotation confidence Not enough data

Genome context

MA_217342: 6799-6908 [+]

Mature pab-miR396d

• Accession: MIMAT0044748
• Description: Picea abies pab-miR396d mature miRNA
• Sequence: 77 - CUCAAGAAAGCUGUGGGAAA - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918