Stem-loop pab-MIR396s

Accession

MI0036665

Description

Picea abies pab-MIR396s precursor miRNA

Literature search

1 open access papers mention pab-MIR396s
(5 sentences)

Sequence

auccuguuauauuuUUCCACGGCUUUCUUGAACUUcacgaucaguacuguuggcagcggccgcauagauaacagauccggaugacaagcucaagaaagccgugggaaaauauagaaggau
(((((.(((((((((((((((((((((((((.((((((((((.((.((((((((....)))).))))...)).))))..).)))..)).))))))))))))))))))))))))).)))))

Structure

     g                         A  --   - --    a  --a    -    a 
auccu uuauauuuUUCCACGGCUUUCUUGA CU  Uca c  gauc gu   cugu uggc g
||||| ||||||||||||||||||||||||| ||  ||| |  |||| ||   |||| ||||  
uagga gauauaaaagggugccgaaagaacu ga  agu g  cuag ca   gaua gccg c
     a                         c  ac   a gc    a  aua    c    g 

Annotation confidence Not enough data

Genome context

MA_97867: 7878-7997 [-]

Mature pab-miR396s

• Accession: MIMAT0044763
• Description: Picea abies pab-miR396s mature miRNA
• Sequence: 15 - UUCCACGGCUUUCUUGAACUU - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918